Workstations and Servers

PAIS Multiscale Microscopy Center

Workstations and servers are available to all active users. Contact PAIS-MMC staff to get access information. All computers have storage server shares mounted. Workstations are computers with physical access, i.e., keyboard, mouse and monitor. Servers are only accesible via JupyterHub or SSH.

  1. Workstations
    1. 2409 Workstation
      1. Hardware
      2. Software
  2. Servers
    1. descent
      1. Hardware
      2. Software
    2. expectations
      1. Hardware
      2. Software

Workstations

2409 Workstation

Location: 2409 near 2403 wet lab

Hardware

  • Intel Core i7

Software

  • Windows 11

  • MATLAB R2023a

Servers

descent

gradient descent into madness

  • training neural networks

  • analysis of large data sets

  • workflows that use multiple cores

Hardware

  • 32 Core AMD Threadripper Pro

  • 2X Nvidia A6000 48 GB GPU

  • 512 GB RAM

  • 7 TB M2 data drive

Software

  • Rocky Linux 8

  • JupyterHub

  • MATLAB 2023a

  • Docker

  • Fiji

  • Julia 1.8.0

The A6000 GPUs were provided by a grant from Nvidia. If you use the GPUs in descent for a publshed work, you must include the followng acknowledgment in the publication:

"This research was supported by grants from NVIDIA and utilized an NVIDIA A6000 GPU".

expectations

"I'm not in this world to live up to your expectations..." - Bruce Lee

  • smite

  • SMLM Analysis

  • general purpose

Hardware

  • 8 Core AMD Ryzen

  • Nvidia A4000 GPU

  • 128 GB RAM

Software

  • Ubuntu Linux

  • JupyterHub

  • MATLAB 2021a

  • Docker

  • Fiji

  • Julia 1.8.0

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